PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026451327.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 247aa MW: 27838.1 Da PI: 9.292

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026451327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.8	1.8e-18	5	64	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq++ Le ++ +psa+e++++++kl +++ ++V++WFqN++a++++ XP_026451327.1 5 SRWNPTKEQIDMLEGIYKAgITTPSAAEIQHMTSKLrmygDIEGKNVFYWFQNHKARQRQ 64 7***************99************************************97 PP
2	Wus_type_Homeobox	106.9	1.3e-34	4	66	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+Pt+eQi +Le +yk+G+ tP+++eiq++t++L+ yG ie+kNVfyWFQN+kaR+rq+q XP_026451327.1 4 HSRWNPTKEQIDMLEGIYKAGITTPSAAEIQHMTSKLRMYGDIEGKNVFYWFQNHKARQRQRQ 66 68***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MCNHSRWNPT KEQIDMLEGI YKAGITTPSA AEIQHMTSKL RMYGDIEGKN VFYWFQNHKA 60 RQRQRQVRHS YGSGYHDPRI HFKHQLLHNQ ISSSMGLAPP NTNGFLCSKF SPYCAPAGPS 120 FIPPYAHQHQ NPKVLLPPRS TVIARSASNI VNTRPADSQT LDYAVGNAEN HYHETLPLFP 180 IHPTGIRKSE DKEKDYSGFK NASLTTISLC TASTNRREDD ADADANANAN AAQKENGRRF 240 LDFFATH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59340.1	2e-29	WOX family protein