PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026451418.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 256aa MW: 29214.9 Da PI: 9.4385

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026451418.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.5	4.1e-15	17	63	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+W++e+d+ll + +++ G+g W+ ++ + g++R++k+c++rw++yl XP_026451418.1 17 GAWSEEDDLLLRKFIEKNGPGKWRQVPLRAGLNRCRKSCRLRWLNYL 63 89*******************************************97 PP
2	Myb_DNA-binding	36.2	1.4e-11	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ ++E +l+ + +k+lG++ W++Ia ++ gRt++++k+ +++yl XP_026451418.1 69 RGAFEPDEVDLITRMHKLLGNR-WSLIAGRVS-GRTANDIKNLYNTYL 114 899*****************.*****.**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MEGTSATSSS LKGLREGAWS EEDDLLLRKF IEKNGPGKWR QVPLRAGLNR CRKSCRLRWL 60 NYLQPNIKRG AFEPDEVDLI TRMHKLLGNR WSLIAGRVSG RTANDIKNLY NTYLKKTYSA 120 NKQKKLSTTP KTKVLRPLPR TFSKRSQWTL NKASTSVPTI GMENNTITAK ISTSPTNENF 180 NNLEELTNNN LLSVDDYFPQ LSSKNVNSTD DYYCSFDVGQ GADKGCKVGD YWNNDMYLDD 240 DLWKILGEDE EGHFII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	2e-55	MYB family protein