PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026451441.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 189aa    MW: 21578.4 Da    PI: 4.54
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026451441.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.38.3e-23957149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k+i++k +r+vtf+kRr+g++KKA EL+ L++a++++++fs++gkl+++
  XP_026451441.1  9 KKIDDKKKRSVTFTKRRQGLFKKADELCSLTGADISLLVFSPSGKLFTF 57
                    68**********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MGKKKIEIKK IDDKKKRSVT FTKRRQGLFK KADELCSLTG ADISLLVFSP SGKLFTFGCP  60
NSDEVLNRFP VQEDDGKMTS RSENGDGFWW NDIKIDELDT LEKVDAVREQ LLEVKGLVAK  120
RKEELLALST PSAAAKETST DNMEDSCMFS VNEDNHSWFP TLTSDDMNEF DDLLKDFYVD  180
QNMQQLPIY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1317KKKIEIKKIDDKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.13e-19M-type_MADS family protein