PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026451482.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

LBD

Protein Properties

Length: 165aa MW: 18841.2 Da PI: 7.2642

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026451482.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	138.7	2e-43	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC++dC++ pyfp+++p++fa+vhk+FGasn++k+lk+lpe++r +a++sl++eAe r++dPvyG+vgvi++lqqq+++++ +la XP_026451482.1 7 RCAACKHLRRKCPSDCIFYPYFPSNNPQRFAYVHKIFGASNISKMLKQLPEHQRAEAANSLYMEAEFRVQDPVYGCVGVISDLQQQIQTTQFQLA 101 6********************************************************************************************** PP DUF260 96 llkee 100 +++++ XP_026451482.1 102 ETQAH 106 99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MIPSNTRCAA CKHLRRKCPS DCIFYPYFPS NNPQRFAYVH KIFGASNISK MLKQLPEHQR 60 AEAANSLYME AEFRVQDPVY GCVGVISDLQ QQIQTTQFQL AETQAHMTFS KPHQPNEDQH 120 QLQQQPYPPQ TFSPLSSEQI GVEGTSHSFL NNTMLHQSPP LPDNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26660.1	1e-43	LBD family protein