PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026451555.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 188aa    MW: 21477.1 Da    PI: 4.4202
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026451555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF61.31.1e-19957149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k+ie+k +r+v+f+kRrng++ KA+EL+ L++a +++i+fs+ gk +++
  XP_026451555.1  9 KKIEDKKQRSVSFTKRRNGLFNKAHELCRLTGASISMIVFSPGGKPFTF 57
                    68******************************************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MGKRKIEIKK IEDKKQRSVS FTKRRNGLFN KAHELCRLTG ASISMIVFSP GGKPFTFGCP  60
DEILNRFPAN EEEDDDGKRV RSENGDGFWW KDLNMEEVDT LEKVQVVRDQ LLQVKDLVNK  120
RKQESVAVSV PPAVAEATSA DNIEGSCMFV MEEDEDSSWF SNITFGDNDM EEFDKLFKDF  180
DVEPPLID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.17e-16M-type_MADS family protein