PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026451564.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 249aa MW: 28207.2 Da PI: 8.3336

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026451564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.4	1.2e-18	5	64	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq++ Le +++ +psa+e++++++kl +++ ++V++WFqN++a++++ XP_026451564.1 5 SRWNPTKEQIDMLEGFYKAgITTPSAAEIQHMTSKLrmygDIEGKNVFYWFQNHKARQRQ 64 7***************98************************************97 PP
2	Wus_type_Homeobox	104.7	5.9e-34	4	66	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+Pt+eQi +Le yk+G+ tP+++eiq++t++L+ yG ie+kNVfyWFQN+kaR+rq+q XP_026451564.1 4 HSRWNPTKEQIDMLEGFYKAGITTPSAAEIQHMTSKLRMYGDIEGKNVFYWFQNHKARQRQRQ 66 68***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MCNHSRWNPT KEQIDMLEGF YKAGITTPSA AEIQHMTSKL RMYGDIEGKN VFYWFQNHKA 60 RQRQRQIRHS YGYHDPRNHF NHQFLHNQIS SPMGLAPPNT NGFFCSKTSP YCASAGPSFF 120 PPYAHQHQNP KVLLPPRSTV IARSASNIVN KRPADSQTLD YAVDQNSDYA VGNAENHYHE 180 TLPLFPIHPT GIRKSEDKEK DYSGFKNASL TTISLCTAST NRREDDADAD ANAAQKENGG 240 QFLDFFATH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59340.1	5e-30	WOX family protein