PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026451757.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 146aa    MW: 16881.7 Da    PI: 10.462
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026451757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF52.56.4e-17959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+++  rq  +++R+ g+ KKA ELS+LC+++v + +fs+ g+  +++s
  XP_026451757.1  9 KKIKEYGPRQGAYTNRKRGVVKKADELSILCNIDVVLTMFSPAGRPTTFAS 59
                    67999999*************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MGRAKLEIKK IKEYGPRQGA YTNRKRGVVK KADELSILCN IDVVLTMFSP AGRPTTFASN  60
GRSEEIYLRY FRRPESRRGH VLDASPIVGR LKCLKREREL METISRREAL KKEINLINEK  120
VKDTSDKLRS CFSSIIFTDL ILYQVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.11e-19MIKC_MADS family protein