PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452286.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 336aa MW: 37921.4 Da PI: 8.4445

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eE ++l d++++ G ++W++ ++ g++R++k+c++rw +yl XP_026452286.1 14 KGPWTPEENQKLTDYIHKNGHRSWRALPKLAGLNRCGKSCRLRWSNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.1	1.5e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ +E++l++ ++ lG++ W+ Ia +++ gRt++++k++w+++ XP_026452286.1 67 RGKFSDDEEKLIISLHSVLGNK-WSQIATHLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MGRSPSRDEI GWKKGPWTPE ENQKLTDYIH KNGHRSWRAL PKLAGLNRCG KSCRLRWSNY 60 LKPGIKRGKF SDDEEKLIIS LHSVLGNKWS QIATHLPGRT DNEIKNYWNT HIKKKLLQMG 120 IDPITHRPRT DLNLLANLSN LLVAANILNL MNPLDNATRI QADAQAQLAK IQLLNNLLQV 180 MTNGASSSTQ PPIMELLNQL RLVPNRDTNN LFNQYLEPNS QLLNTLGYLP SSSSQTPPPY 240 NFSTSKHSDV TNDNENIPAE DADCYRFEQG SSSISNNYLN DDDDNMNVQH FLNSPVYIPA 300 LVSASPERNI NNINKPDTRT TTNSSTSTTF ETTWGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02940.1	8e-77	MYB family protein