PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026452375.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 158aa    MW: 18272.4 Da    PI: 8.1931
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026452375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR177.92e-2441124390
            FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     Y++YAk+ GF vrk++++k+ ++g i + t+vC++ g++ +++k+     ++r+++r++Cka ++ ++++++kwe+t+l+l+HnH+++
  XP_026452375.1  41 YKAYAKREGFAVRKRTNRKN-EDGIIRNVTYVCNRAGNPVNKTKN---IAKPRKSNRCDCKAYVTARLDDEDKWEITQLKLDHNHTFN 124
                     9***************9998.9999***************99888...999**********************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MAVVSLDDTE KEAGEKTQNI DEDELYIGKK FETHDDLFSA YKAYAKREGF AVRKRTNRKN  60
EDGIIRNVTY VCNRAGNPVN KTKNIAKPRK SNRCDCKAYV TARLDDEDKW EITQLKLDHN  120
HTFNPRIPME KNFRSVVNQY GGYDKVDCSE QDCRNALA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.12e-17FAR1 family protein