PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026452509.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 153aa    MW: 16980.4 Da    PI: 8.5709
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026452509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.94.1e-095779527
                    --SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH  5 lCrffartGtCkyGdrCkFaHgp 27
                    +C++f rtG+C+yGd+Ck+ H++
  XP_026452509.1 57 ICNHFIRTGFCQYGDSCKYFHPK 79
                    8********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MPLPKYYCDY CDKQFQYTTF ARKRHCEGLQ HQRAKAFYYD SLKDPNRIQG ESFGKGICNH  60
FIRTGFCQYG DSCKYFHPKP NLQSPSVPGA MVTNFAETVQ PPIAVGNQIA GRGGTVPMDL  120
IQGGMGVSLG NLPPSLRPPP EGGYPTLPFV DWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.18e-44C3H family protein