PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452578.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

YABBY

Protein Properties

Length: 196aa MW: 22166.6 Da PI: 9.034

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	74.5	3.5e-23	10	87	4	81
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee.lleelkveeen 81 + eq+Cy+ CnfCn ilavsvP +slf++vtvrCGhC++l svn+ q l+ ++ l++ ++ ++++ + ++ XP_026452578.1 10 SFVNEQICYIPCNFCNIILAVSVPCSSLFETVTVRCGHCANLWSVNMGAVLQSLSLQD-LQRIDFPSsSKHNQDIQVMQ 87 5789*********************************************999999888.44433333133333333333 PP
2	YABBY	94.1	3.3e-29	80	165	98	170
YABBY 98 seklsenedeevprvpp..virPPekrqrvPsaynrfi...........keeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++ ++ + ++++ + v++PPek+ rvPsayn+fi +eeiqrika+nPdi hr afs+aaknWahfP++h+gl XP_026452578.1 80 NQDIQVMQVTTAAKTEKriVNQPPEKKHRVPSAYNQFIncchpfplvsfREEIQRIKANNPDINHRKAFSTAAKNWAHFPHAHYGL 165 33333333333333333339***************9666666666666********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MMSSISSTMS FVNEQICYIP CNFCNIILAV SVPCSSLFET VTVRCGHCAN LWSVNMGAVL 60 QSLSLQDLQR IDFPSSSKHN QDIQVMQVTT AAKTEKRIVN QPPEKKHRVP SAYNQFINCC 120 HPFPLVSFRE EIQRIKANNP DINHRKAFST AAKNWAHFPH AHYGLKLESK NNQAKLREES 180 CKMFAAYKSC TILGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	1e-72	YABBY family protein