PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452580.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

YABBY

Protein Properties

Length: 184aa MW: 20769 Da PI: 8.8691

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	74.9	2.8e-23	10	76	4	71
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeel 71 + eq+Cy+ CnfCn ilavsvP +slf++vtvrCGhC++l svn+ q l+ ++ ++ ++ XP_026452580.1 10 SFVNEQICYIPCNFCNIILAVSVPCSSLFETVTVRCGHCANLWSVNMGAVLQSLSLQDL-QDIQVMQV 76 5789*********************************************9999998884.44444443 PP
2	YABBY	91.7	1.8e-28	84	153	112	170
YABBY 112 vppvirPPekrqrvPsaynrfi...........keeiqrikasnPdishreafsaaaknWahfPkihfgl 170 v++PPek+ rvPsayn+fi +eeiqrika+nPdi hr afs+aaknWahfP++h+gl XP_026452580.1 84 KRIVNQPPEKKHRVPSAYNQFIncchpfplvsfREEIQRIKANNPDINHRKAFSTAAKNWAHFPHAHYGL 153 2459***************9666666666666********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MMSSISSTMS FVNEQICYIP CNFCNIILAV SVPCSSLFET VTVRCGHCAN LWSVNMGAVL 60 QSLSLQDLQD IQVMQVTTAA KTEKRIVNQP PEKKHRVPSA YNQFINCCHP FPLVSFREEI 120 QRIKANNPDI NHRKAFSTAA KNWAHFPHAH YGLKLESKNN QAKLREESCK MFAAYKSCTI 180 LGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	5e-65	YABBY family protein