PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452581.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

YABBY

Protein Properties

Length: 173aa MW: 19495.6 Da PI: 9.1465

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452581.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	75.4	1.9e-23	10	76	4	71
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeel 71 + eq+Cy+ CnfCn ilavsvP +slf++vtvrCGhC++l svn+ q l+ ++ ++ ++ XP_026452581.1 10 SFVNEQICYIPCNFCNIILAVSVPCSSLFETVTVRCGHCANLWSVNMGAVLQSLSLQDL-QDIQVMQV 76 5789*********************************************9999998884.44444443 PP
2	YABBY	113	5.3e-35	82	142	109	170
YABBY 109 vprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + v++PPek+ rvPsayn+fikeeiqrika+nPdi hr afs+aaknWahfP++h+gl XP_026452581.1 82 TE-KRIVNQPPEKKHRVPSAYNQFIKEEIQRIKANNPDINHRKAFSTAAKNWAHFPHAHYGL 142 22.2459*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MMSSISSTMS FVNEQICYIP CNFCNIILAV SVPCSSLFET VTVRCGHCAN LWSVNMGAVL 60 QSLSLQDLQD IQVMQVTTAA KTEKRIVNQP PEKKHRVPSA YNQFIKEEIQ RIKANNPDIN 120 HRKAFSTAAK NWAHFPHAHY GLKLESKNNQ AKLREESCKM FAAYKSCTIL GKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	1e-69	YABBY family protein