PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026452585.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family YABBY
Protein Properties Length: 194aa    MW: 21904.1 Da    PI: 9.1429
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026452585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY190.48.7e-59101634170
           YABBY   4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvss 98 
                      +  eq+Cy+ CnfCn ilavsvP +slf++vtvrCGhC++l svn+    q l+ ++         ++ +++++ + ++   ++++++  +v +
  XP_026452585.1  10 SFVNEQICYIPCNFCNIILAVSVPCSSLFETVTVRCGHCANLWSVNMGAVLQSLSLQDL--------QTPNNGDHFQRIDFPSSSKHNQDIQVMQ 96 
                     5789********************************************99999998884........4556666666666666666665544444 PP

           YABBY  99 eklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                      +    +  ++ +   v++PPek+ rvPsayn+fikeeiqrika+nPdi hr afs+aaknWahfP++h+gl
  XP_026452585.1  97 VT----TAAKTEK-RIVNQPPEKKHRVPSAYNQFIKEEIQRIKANNPDINHRKAFSTAAKNWAHFPHAHYGL 163
                     22....2222222.3479****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MMSSISSTMS FVNEQICYIP CNFCNIILAV SVPCSSLFET VTVRCGHCAN LWSVNMGAVL  60
QSLSLQDLQT PNNGDHFQRI DFPSSSKHNQ DIQVMQVTTA AKTEKRIVNQ PPEKKHRVPS  120
AYNQFIKEEI QRIKANNPDI NHRKAFSTAA KNWAHFPHAH YGLKLESKNN QAKLREESCK  180
MFAAYKSCTI LGKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.12e-77YABBY family protein