PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026452673.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 106aa    MW: 11967.8 Da    PI: 10.2292
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026452673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.91.1e-181562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+ +++++G+g+W++++   g+ R+ k+c++rw +yl
   XP_026452673.1 15 KGPWTPEEDLILASYIEEHGPGNWRSVPTNAGLLRCSKSCRLRWSNYL 62
                     79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MGRPPCCDKV LGITKGPWTP EEDLILASYI EEHGPGNWRS VPTNAGLLRC SKSCRLRWSN  60
YLRPGIKRGN FTEFEEKKII TLQSLWGNKG ITQMGSNSFK SSPKNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.19e-52MYB family protein