PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026452680.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 244aa    MW: 27838.8 Da    PI: 9.2879
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026452680.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.83.6e-17135224198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v++  +l lp+ f++++  + +++  +tl de+g +   ++ ++k++    l++GW++F+ +++L +gD +vF+l++ +ef  +v 
  XP_026452680.1 135 FVKPMLHSHVNRGFWLGLPNGFCKKYL-P-KRDALITLVDEKGDECVTNYLVEKTG----LSAGWRGFALDHQLIDGDACVFQLTKPTEF--KVY 221
                     89************************5.3.36679***************777776....***********************9876666..888 PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_026452680.1 222 IVR 224
                     877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MVMSSSKYEE TRLQRIEENK KRMEELKLCS LVLNFKTSSS SSKPSQAKPP KRRMIQKKLE  60
FVEVRRSSRN TDKPSPVYKE VPVFEYERAP RNNSRARGLR DSMENFPVAS EKERAIATEK  120
AYELELSLGN EFPSFVKPML HSHVNRGFWL GLPNGFCKKY LPKRDALITL VDEKGDECVT  180
NYLVEKTGLS AGWRGFALDH QLIDGDACVF QLTKPTEFKV YIVRAANVSY PEESVGVSNG  240
EESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.15e-61B3 family protein