PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452695.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 141aa MW: 16236.7 Da PI: 10.2134

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452695.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	86.1	2e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i+n + rqvtfskRrng++KKA+ELS+LCdaev +i+fsst+klye+ss XP_026452695.1 10 KIDNITSRQVTFSKRRNGLIKKAKELSILCDAEVGLIVFSSTDKLYEFSS 59 69**********************************************96 PP
2	K-box	62.9	1.2e-21	76	140	8	69
K-box 8 s...leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + +++++a+ +++e+a k + +nLq+ +R+++G++L sLs keLq+Le+qLe sl+ +R +K XP_026452695.1 76 NsllNATTEAKFWKREAATFKHQFQNLQEGHRKMMGQELCSLSAKELQNLENQLEMSLRGVRMQK 140 3356788999****************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
MGRGKIVIRK IDNITSRQVT FSKRRNGLIK KAKELSILCD AEVGLIVFSS TDKLYEFSST 60 SMNSLLERYD TSKEENSLLN ATTEAKFWKR EAATFKHQFQ NLQEGHRKMM GQELCSLSAK 120 ELQNLENQLE MSLRGVRMQK V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	2e-66	MIKC_MADS family protein