PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452712.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 210aa MW: 24141.3 Da PI: 9.2465

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	67.1	3.2e-21	20	67	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEde+l+++++ +G++ Wk+Ia + g++R++k+c++rw +yl XP_026452712.1 20 KGAWTTEEDERLAQVIETHGPRKWKSIATKAGLNRCGKSCRLRWMNYL 67 79********************************************97 PP
2	Myb_DNA-binding	50.7	4.2e-16	73	118	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_026452712.1 73 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 118 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MAMKDEAITT KKSTSSSVNK GAWTTEEDER LAQVIETHGP RKWKSIATKA GLNRCGKSCR 60 LRWMNYLRPN IKRGNISDQE EDLILRLHKL LGNRWSLIAG RLPGRTDNEI KNYWNSHLSK 120 KIQQQEKKRR RGPKAQVCNK VQETKVAVQL EKEDVKVSEE ATSSEAGELQ TNVTSFNADD 180 QFFDFSSEGL TNMEWMSQFL DVNDVLCWFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40330.1	2e-52	MYB family protein