PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026452736.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family AP2
Protein Properties Length: 189aa    MW: 21518.3 Da    PI: 9.9658
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026452736.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2452.7e-14110168155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++d ++g   A+I+d  +   g ++ k+++lgk++ ++ Aaka++ a++k++g
  XP_026452736.1 110 SQYRGVTRDVRKGIHKAQIWDgSCRkEGiRKgKQVYLGKYDEEDAAAKAYDLAALKYFG 168
                     78*******************65555668446**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEAGDSKSRR KISPRLLDLN SEWAVEEERR LFGGIEERKL ELKLGPPNEE EKGFSNGSNR  60
KNIVKSPSSN TLNSTVNKTP ISLLFTSTLT STTTTNNTFH YNYKKKQKIS QYRGVTRDVR  120
KGIHKAQIWD GSCRKEGIRK GKQVYLGKYD EEDAAAKAYD LAALKYFGPT ARINFPLANY  180
ETEIKEMEC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.17e-19AP2 family protein