PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026452968.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 379aa MW: 43592.8 Da PI: 6.2938

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026452968.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.1	5e-16	158	253	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 +k+l++sdv+++gr+vlpkk e+h ++ +e++++ ++ +s ++W +++++ ++ks++yvl+ ++ e+vk+n+Lk gDfv+++ ++++++ XP_026452968.1 158 QKELKNSDVNSLGRIVLPKKDSEAHlpSLTVKEGIQIAVREvLSPKVWFMRYKFwpNNKSRMYVLE-NTGEYVKQNELKCGDFVILY--QDENKQ 249 799**********************666668889999997888***998999999999.********************..556666 PP .EEE CS B3 92 lvvk 95 l+++ XP_026452968.1 250 LYIS 253 6665 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MDPRNVYGEE YHDHQGEGDY LRTINEGHYK PQVGVPQFSY ISNQSCASTS YILNQNCAAI 60 SFNYFRQPQI DQSQYYPNVH CSGFVNPSLF PSIDQNGLLS TSSMGFFHSG LHSQRQIIAT 120 RHRLVNSSCR IQRPRRWGPS VTKAARIKRK MRLKFILQKE LKNSDVNSLG RIVLPKKDSE 180 AHLPSLTVKE GIQIAVREVL SPKVWFMRYK FWPNNKSRMY VLENTGEYVK QNELKCGDFV 240 ILYQDENKQL YISFQKAQRP TLEGEPNKEE KESRTGLERE HESPHAEVED QRLLISEDML 300 RQQGIEFHEP STSSNSIAVE GDLFCLDGTI YLDLSNCNLS ELDILPNFDD SDLSLYDDLI 360 NDFNQDFGTA KDDPSKTAK

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MDPRNVYGEE YHDHQGEGDY LRTINEGHYK PQVGVPQFSY ISNQSCASTS YILNQNCAAI  60
SFNYFRQPQI DQSQYYPNVH CSGFVNPSLF PSIDQNGLLS TSSMGFFHSG LHSQRQIIAT  120
RHRLVNSSCR IQRPRRWGPS VTKAARIKRK MRLKFILQKE LKNSDVNSLG RIVLPKKDSE  180
AHLPSLTVKE GIQIAVREVL SPKVWFMRYK FWPNNKSRMY VLENTGEYVK QNELKCGDFV  240
ILYQDENKQL YISFQKAQRP TLEGEPNKEE KESRTGLERE HESPHAEVED QRLLISEDML  300
RQQGIEFHEP STSSNSIAVE GDLFCLDGTI YLDLSNCNLS ELDILPNFDD SDLSLYDDLI  360
NDFNQDFGTA KDDPSKTAK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	152	RIKRKMR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	7e-40	B3 family protein