PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453052.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 237aa MW: 27097.9 Da PI: 9.7317

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453052.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.8	1.4e-14	9	53	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT Ede+l+ +v ++G+++W++I+ ++ ++++ +ck rw ++l XP_026453052.1 9 IWTNAEDEILKSGVMKYGSNQWSRISTLLP-RKSAIHCKARWCQWL 53 5***************************.*********9996 PP
2	Myb_DNA-binding	37.8	4.5e-12	62	104	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT +Ede+l+++ k +++ WktIa+t+g Rt qc++r+ k+l XP_026453052.1 62 EWTRQEDERLLHLSKVMPSQ-WKTIASTIG--RTSSQCIDRYEKLL 104 6****************9.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MRTVMKGGIW TNAEDEILKS GVMKYGSNQW SRISTLLPRK SAIHCKARWC QWLDPSIKKI 60 VEWTRQEDER LLHLSKVMPS QWKTIASTIG RTSSQCIDRY EKLLDAACGV DSKSDRPDNY 120 DPRKLRPGEI DPNPEARPAR PDPVDWDDDA EEMLSAARAR LANISGKKAK RRAREKILEE 180 ASRLACLQKK RELLAAGITD TKQQRGKEKV TDYNAEIFME KKPPSGFYDA THEAIRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	1e-101	MYB family protein