PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026453060.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 228aa    MW: 26113.8 Da    PI: 5.0245
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026453060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF64.51.1e-204492149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k i +  +r+vtfskRr+g++KKA EL+ L++a++++ +fs++gkl+++
  XP_026453060.1 44 KMIHDRKKRSVTFSKRRQGLFKKADELCRLTGADISLSVFSPSGKLFTF 92
                    67999*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MKLCFFSGMD AFHWVLNFSR LNILWAVLCC GIIMGTGRKK IEIKMIHDRK KRSVTFSKRR  60
QGLFKKADEL CRLTGADISL SVFSPSGKLF TFGCSNSDEV LYRFPVKEEE KEVDGNNSRS  120
ENGDGFWWNN LNIDELDTLE KVDAVTEQLL QVQNLVVKRK EELLAALSTS SAAAKETTTS  180
NMEDSCMFSV KQEDDSWFPS LTSGYMNEFD ELLKDFYVDQ KMQQLPAY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13852RKKIEIKMIHDRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.19e-21M-type_MADS family protein