PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026453133.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 234aa    MW: 26404.5 Da    PI: 8.3084
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026453133.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260107.51.1e-3317113196
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     aCaaCk++r+kC+++C+l+p fp e+++kf++vhklFG+sn++kllk l++ + r++a++sl++eAear rdP++G +g ++k++ +l +l +++
  XP_026453133.1  17 ACAACKHQRKKCSQNCILSPFFPPEKKEKFQAVHKLFGVSNISKLLKGLHTLDeRKRAIDSLIWEAEARERDPIEGGFGAFKKINVELISLTNHV 111
                     7************************************************66554*******************************9998888776 PP

          DUF260  95 al 96 
                       
  XP_026453133.1 112 RI 113
                     65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MDEKNDVIKA NNNPRQACAA CKHQRKKCSQ NCILSPFFPP EKKEKFQAVH KLFGVSNISK  60
LLKGLHTLDE RKRAIDSLIW EAEARERDPI EGGFGAFKKI NVELISLTNH VRISNQPGLP  120
KIGTNTISSD SKALMSWENS ANNGYAYGAY GNVSNVANNN YIPSNGRYNN INTNGYKEAE  180
RAFGYQGFSV LPHEQFHRQY FQSDQQNGVV NEKSDDSQSL VQEVMKDDPI IMEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.13e-31LBD family protein