PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026453264.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 198aa    MW: 22416.5 Da    PI: 4.554
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026453264.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.3e-103072754
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     +ErrRR +++++++ Lr  +P+      + ++Ka++L  A+ YI+ L
  XP_026453264.1 30 DAERRRRGKLKQRINDLRAAVPNI-----TNMTKAATLDDAITYINGL 72
                    68*********************6.....58**************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MKFAACCGSG RGRGTRNEDG ILEFKSKNLD AERRRRGKLK QRINDLRAAV PNITNMTKAA  60
TLDDAITYIN GLKQQVDGLT NCLEQMEDTT VPQAAEEEET EVQVEMDDQN IEKFNIDEEV  120
KVTYLEENKF CIKIICYSKR GIFTRLMELM SSLGFEIMDN NFTSFKGVCL TTLSVKGSQV  180
DVTELEKLEE YLLQAVTS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13341RRRRGKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.15e-34bHLH family protein