PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026453379.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 321aa    MW: 36324.5 Da    PI: 6.7588
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026453379.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.51.5e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l+++++ +G g+W++++r  g+ R++k+c++rw +yl
   XP_026453379.1 14 RGLWSPEEDEKLINYITTHGHGCWSSVPRLAGLQRCGKSCRLRWINYL 61
                     788*******************************************97 PP
2Myb_DNA-binding46.86.7e-1567109145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      rg+++  E  l+++++++lG++ W+ Ia++++ gRt++++k++w+
   XP_026453379.1  67 RGSFSHHEASLILELHRMLGNR-WAQIAKHLP-GRTDNEVKNFWN 109
                      899*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MGHHSCCNKQ KVRRGLWSPE EDEKLINYIT THGHGCWSSV PRLAGLQRCG KSCRLRWINY  60
LRPDLKRGSF SHHEASLILE LHRMLGNRWA QIAKHLPGRT DNEVKNFWNS SIKKKLISPP  120
RNHHNHTTET ATIFPMSSTP ASTSNEGLLS SVIVSTNTTN TNFTFPDHNQ HPKHVYDIPS  180
PTSLVQSFDQ GIEFTKDPVY LNVDWVMPQT SQPLLYDPTW SSFDIDNHMH TNTDSTDLIN  240
PDDTLHDDQK IEEFINGNEC RILSSTNTSH GQVDHSSTGI APCYFPSHQP FLYDPANLLN  300
NQLECAADLI FIPSSAATPS F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.24e-76MYB family protein