PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453590.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 400aa MW: 45226.7 Da PI: 5.7953

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453590.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.7	7.3e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd l+ ++ q G+g +W + ++++g++R++k+c++rw++yl XP_026453590.1 14 KGPWSPEEDATLKSYIDQNGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.7	4.6e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ ++ G++ W+ Ia+ ++ gRt++++k++w++ XP_026453590.1 69 GGFSEEEDTIICNLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MGRAPCCDKA NMKKGPWSPE EDATLKSYID QNGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDTIIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGR 120 RKDSQARRLS SSIDKDLKDS NEEDNSYANT LSNSALERLQ LHMQFQNLQT PLSFYNNPVL 180 WPKLHPLGEK IFQDHQHGSN MMNINPTAES SPFIQKKPNS QDGIASHQST TFCELSISSA 240 ELERDDSATR NPNNGNDHLG YSLEGFSSFN GANNVVDENI MNWKSNGGVE QLNTDNFQSS 300 VFGLQAELTE LLNHNKTSGF EVNENHHSRK NSTISETDYW FKEMDGNSSK DSKSWWTSTT 360 TDFDTISSSS NSWDNSASAY HSTANDEQGM FQEYVLEYDL

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MGRAPCCDKA NMKKGPWSPE EDATLKSYID QNGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDTIIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGR  120
RKDSQARRLS SSIDKDLKDS NEEDNSYANT LSNSALERLQ LHMQFQNLQT PLSFYNNPVL  180
WPKLHPLGEK IFQDHQHGSN MMNINPTAES SPFIQKKPNS QDGIASHQST TFCELSISSA  240
ELERDDSATR NPNNGNDHLG YSLEGFSSFN GANNVVDENI MNWKSNGGVE QLNTDNFQSS  300
VFGLQAELTE LLNHNKTSGF EVNENHHSRK NSTISETDYW FKEMDGNSSK DSKSWWTSTT  360
TDFDTISSSS NSWDNSASAY HSTANDEQGM FQEYVLEYDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	2e-97	MYB family protein