PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453916.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 542aa MW: 60666.8 Da PI: 10.1313

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.7	2.7e-08	10	61	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 +++WT E+ l+ +v ++G g Wk I + Rt ++k++w++ XP_026453916.1 10 KLKWTLPEEAALKSGVDKHGAGKWKNIVSDPEfgpclVSRTNVDLKDKWRNM 61 689************************99999**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MVDPITPRRK LKWTLPEEAA LKSGVDKHGA GKWKNIVSDP EFGPCLVSRT NVDLKDKWRN 60 MTGESSYRPK VKLVPTTTHS KTPSKSAICN PADVYTEVKW RGSVEISSSN RSRDEISGMT 120 DNSCNGSLGA SAKRNGSLYP IEVLVAAIES IDSNELVRVS EEPTEDILVP DNPKENKLAV 180 PNFLRKRFRE KPPQNYAIQK KAVKKFKSSS MVDSSNFETL MMAVNYVSKN DNDEPAEEKE 240 THSLLDNAEK QSEAVLVNKS VAVSSGIHQV LGDMSANSAE GRSLRIRKLA SFELSILPEG 300 NTLVSDRLLG IKKLTSFKLG SLQEGNTSIR KSSKVCSSYN KVFSPRNNDQ QRAYMSAEKS 360 CREQCLLMAN SHGGNVCGCE NRQTSNMTSE QQRLQKNFCW RERRKRLDAE AEAYILKDRR 420 RQHSFLLQHP STNSQKLQAP PAIMGQHVIS ECQVLGHDTS VKISSNGFPS YNEKGFAETV 480 CDRSASQKAT QQRRRASISA KKSAKKLEEH QCLLKRLRRR FLGQNDVGMG QMHRQTTSKL 540 QV

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MVDPITPRRK LKWTLPEEAA LKSGVDKHGA GKWKNIVSDP EFGPCLVSRT NVDLKDKWRN  60
MTGESSYRPK VKLVPTTTHS KTPSKSAICN PADVYTEVKW RGSVEISSSN RSRDEISGMT  120
DNSCNGSLGA SAKRNGSLYP IEVLVAAIES IDSNELVRVS EEPTEDILVP DNPKENKLAV  180
PNFLRKRFRE KPPQNYAIQK KAVKKFKSSS MVDSSNFETL MMAVNYVSKN DNDEPAEEKE  240
THSLLDNAEK QSEAVLVNKS VAVSSGIHQV LGDMSANSAE GRSLRIRKLA SFELSILPEG  300
NTLVSDRLLG IKKLTSFKLG SLQEGNTSIR KSSKVCSSYN KVFSPRNNDQ QRAYMSAEKS  360
CREQCLLMAN SHGGNVCGCE NRQTSNMTSE QQRLQKNFCW RERRKRLDAE AEAYILKDRR  420
RQHSFLLQHP STNSQKLQAP PAIMGQHVIS ECQVLGHDTS VKISSNGFPS YNEKGFAETV  480
CDRSASQKAT QQRRRASISA KKSAKKLEEH QCLLKRLRRR FLGQNDVGMG QMHRQTTSKL  540
QV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72740.1	1e-18	MYB_related family protein