PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026454144.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 875aa    MW: 94568.4 Da    PI: 6.2466
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026454144.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS332.86.5e-1025138741374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                     lv++L+++Ae v+sg+  laq +Larl+++ + p g+p+ R+a+yf+eAL + l+       ++ p ++ s+ +++ ++ a+k fse+sP+l+fs
  XP_026454144.1 513 LVDQLFKAAELVESGNSVLAQGILARLNHQlSHPIGKPLYRAAFYFKEALLQLLST-----PNSPPLKNFSPIDVVMKIGAYKSFSEISPLLQFS 602
                     6899************************9979999*****************9998.....6677888888889********************* PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                     ++t NqaIle+++g +++HiiDfdi+ G+QW++++q++a +++g+psl+i +++s +s+  +k el  t+e L++fA+ lg+ fe++++   +l+
  XP_026454144.1 603 NFTLNQAILESLDGFDHIHIIDFDIGIGGQWASFMQEIAMKNGGAPSLKISAFASFSSNdhHKLELALTKEHLTHFANDLGILFEIDIV---DLD 694
                     ******************************************************98887789999***********************7...555 PP

            GRAS 188 dlel..eeL..rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                     +l++  ++L  +v+++E++aVnl +    +       +s ++++L+lvk+lsPk+vv v++ +d+++ +F ++ l+al+ ys l+dsl+a+  ++
  XP_026454144.1 695 TLDPssWSLpiHVSEKETVAVNLPVGSSCIN------PSSIPALLRLVKQLSPKIVVSVDRGCDRSDLPFSQHCLQALQAYSILLDSLDAT-NSN 782
                     554411444448999**********888886......444567*********************************************999.799 PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     se+ +k+Er+l++++i++ v +++      he+l  Wr  + +aGF+pv++s+++++qa++ll++ +++g++ve++++slvl+W++r+Lvs+SaW
  XP_026454144.1 783 SETINKIERFLVQPRIESTVFQRHLC----HEKLPPWRTLFASAGFSPVTFSNFTETQAECLLKRLQGRGFHVEKRQASLVLCWQRRELVSASAW 873
                     9*******************998888....***************************************************************** PP

            GRAS 374 r 374
                     r
  XP_026454144.1 874 R 874
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 875 aa     Download sequence    
MRGIPFNNLE GSNKFGLISS TTAAAPEAAE ISSLTQFYWK TQEEEIIRAG NSYFFGTEVE  60
PTSVLDTRRS PGSSTSTLSA SSFGGGGGGG RGIVLVAGGF GGGSTDRASV AAVSDNNPLQ  120
KWPTTTTITN QEENSTPAAT PDVSASSGSS SGGGGGSRKD EWGSELQPIS SNHQEIVSSG  180
GSGGGGGINT IISGAEKYGG LAVDDWDNML ETDASPSLLR WIIDDAEDPT SSAALLQGGG  240
EVAGVSHLHN ASSDHHHVGT YNAGFGMVDP TAAAAAGFGF ESIGGGIGGY INLLGGGGGG  300
VGVPGSGFSS GRMNFNNSIQ QQQQQNPSAN FNTTKMSSSP CFNNTGNTTN PFTVSPNHNL  360
LPPPGVFYHS NNQQFEDEKP QLYNPQIMMM NQNQQQLKNN STPPFFVPLP SYQQDQSGCF  420
PPPKRHPGMG GNPSNCHPMQ KNLSFMDSGQ EHLFRKQQHQ QQQNGFPHQL HLLPNHLQQR  480
PPPVMLTKPK LDEHQNQQQN QQQQQQQQQQ QALVDQLFKA AELVESGNSV LAQGILARLN  540
HQLSHPIGKP LYRAAFYFKE ALLQLLSTPN SPPLKNFSPI DVVMKIGAYK SFSEISPLLQ  600
FSNFTLNQAI LESLDGFDHI HIIDFDIGIG GQWASFMQEI AMKNGGAPSL KISAFASFSS  660
NDHHKLELAL TKEHLTHFAN DLGILFEIDI VDLDTLDPSS WSLPIHVSEK ETVAVNLPVG  720
SSCINPSSIP ALLRLVKQLS PKIVVSVDRG CDRSDLPFSQ HCLQALQAYS ILLDSLDATN  780
SNSETINKIE RFLVQPRIES TVFQRHLCHE KLPPWRTLFA SAGFSPVTFS NFTETQAECL  840
LKRLQGRGFH VEKRQASLVL CWQRRELVSA SAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-111GRAS family protein