PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026454278.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 216aa MW: 23924.3 Da PI: 6.5188

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026454278.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.7	8.4e-11	11	54	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W+ e d+ + +a + ++ g +W++Ia ++ g+tl+++ks++ XP_026454278.1 11 TWSREQDKAFENALAIHPEGtenRWEKIAVEVT-GKTLEDVKSHY 54 7*****************************9.********9 PP
2	Myb_DNA-binding	45.6	1.6e-14	119	163	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r +Rt+ q+ s+ qky XP_026454278.1 119 AWTEEEHRLFLLGLEKYGKGDWRSISRNYVVTRTPTQVASHAQKY 163 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MTADETSESS TWSREQDKAF ENALAIHPEG TENRWEKIAV EVTGKTLEDV KSHYDILVED 60 ISGIEAGLVP VPCYVSSPEG SVEHVGEGGA SRKDENSQGN SNHKGKASRL DQERRKGIAW 120 TEEEHRLFLL GLEKYGKGDW RSISRNYVVT RTPTQVASHA QKYFIRLSNS MNKDRRRSSI 180 HDITSVGDAE NISTTSRGPI TGQTNGHFTA GPRAVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	5e-93	MYB family protein