PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026454326.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 250aa    MW: 28434 Da    PI: 5.9127
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026454326.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF25.61.6e-082155742
                    HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  7 snrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                    + r  +f +R +g  KK +EL +LCd+++a +++s+
  XP_026454326.1 21 I-RRKSFKNRIKGFEKKFYELRTLCDVKAAAVVYSE 55
                    4.5569****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MGCNERGKSS SSSINNVDHK IRRKSFKNRI KGFEKKFYEL RTLCDVKAAA VVYSEFMNGA  60
KSLPVNPREF DEVVMLKKFY DQKKMKSKNQ RFCNFDNLST VESLERIERD LESKFNMISE  120
REKQLKAGVA SSSSSSSSSN CCYQDDEMKK NFGVFNSTNC ESSSLVVGSV YEHGSSSSDV  180
LYQQQPQPLI TFDPAGLTTT TAADNMFCDY EPRFADMIEL EFQRLNCSTS YMDMMMNTTS  240
PFDGPEFLLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31640.17e-09M-type_MADS family protein