PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026454339.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 538aa    MW: 59209.7 Da    PI: 4.8212
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026454339.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS417.21.4e-1271655331374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg..dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     lv+lL++cAeav++g+ +la al+++++ + +       + ++a yf  AL++r+++  ++  + + p ++s   ++e+ + ++ f+e++P+lkf
  XP_026454339.1 165 LVHLLMTCAEAVQHGHISLAAALIEEMRYTLTRVNtlCGIGKVAGYFIDALSRRVFS--PSSQEGFLPATDS---TQENEFLYHQFYEACPFLKF 254
                     68**************************99555551369******************..6666666665555...5777788999********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +h+taNqaI ea++g+++vH+iDf++ +GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa++A +++v+f+f+ + a+rl+d
  XP_026454339.1 255 AHFTANQAIIEAFQGHDCVHVIDFNLVHGLQWPALIQALALRPGGPPVLRLTGIGPPSTDGSDSLREIGLRLAEVAWSVNVKFSFRGVSASRLDD 349
                     ****************************************************************************************999**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     +++++L+vkp Ea+a+n+++qlhrll  + +  s ++d+vL+ ++sl+Pk+v+vveqeadhn++ Fl rf+eal+yys++fdslea      +++
  XP_026454339.1 350 VKPWMLQVKPFEAVAINSIMQLHRLLGTDSTRGSpPIDSVLSWIRSLNPKIVTVVEQEADHNQPGFLSRFTEALYYYSTIFDSLEAC---GLQQE 441
                     **************************9998888889************************************************888...45777 PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +   ++++++ei+nv++ceg +r+erhe l kWr+rl +aGF+p++l+++a kqa++ll  ++ +gy+vee++g l+l W++rpL+++SaW+
  XP_026454339.1 442 KAFAEMYIQKEICNVLSCEGVSRVERHEPLIKWRNRLVDAGFGPLHLGSNALKQARMLLTLFSAEGYSVEENEGFLTLNWQSRPLIAASAWQ 533
                     7788888************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    
MGPYDLGISI GSSNNSGSNC FHNEKLVTPD IDGFLASDAV LYSMLNELNN QSLPNYSSAS  60
HHHHNLSNLS ADLELIDSLI PAPESLVPTA GNIAWSDQNG INQQPQINQA SPPAQQHQMT  120
TASVVSPKNE IEMSYESSEN VQELGMVSAS SPAEATEEED PSIRLVHLLM TCAEAVQHGH  180
ISLAAALIEE MRYTLTRVNT LCGIGKVAGY FIDALSRRVF SPSSQEGFLP ATDSTQENEF  240
LYHQFYEACP FLKFAHFTAN QAIIEAFQGH DCVHVIDFNL VHGLQWPALI QALALRPGGP  300
PVLRLTGIGP PSTDGSDSLR EIGLRLAEVA WSVNVKFSFR GVSASRLDDV KPWMLQVKPF  360
EAVAINSIMQ LHRLLGTDST RGSPPIDSVL SWIRSLNPKI VTVVEQEADH NQPGFLSRFT  420
EALYYYSTIF DSLEACGLQQ EKAFAEMYIQ KEICNVLSCE GVSRVERHEP LIKWRNRLVD  480
AGFGPLHLGS NALKQARMLL TLFSAEGYSV EENEGFLTLN WQSRPLIAAS AWQPFASN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-135GRAS family protein