PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026455101.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 418aa MW: 46752.6 Da PI: 8.7839

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026455101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.5	3.1e-18	34	79	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+q+G+ +W++Ia++++ gR++k+c++rw++ XP_026455101.1 34 RGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQ-GRSGKSCRLRWFNQ 79 899***************************.*********996 PP
2	Myb_DNA-binding	49.2	1.2e-15	86	129	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r +++ eE+++l+ a++ +G++ W++I+r ++ gRt++ +k++w+ XP_026455101.1 86 RRPFSVEEEDRLLGAHRVHGNK-WALISRLFP-GRTDNAVKNHWHV 129 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MEADTVSSSV GGRSSTSRGN NNNIDDLTNK SCPRGHWRPA EDEKLRQLVE QYGPQNWNSI 60 AEKLQGRSGK SCRLRWFNQL DPRINRRPFS VEEEDRLLGA HRVHGNKWAL ISRLFPGRTD 120 NAVKNHWHVI MSRKQRERSK LLYGSKGSSS SSSINYYDKS NGFVGIYSSL RSSHNNDLYN 180 CSNEFQYENS CSSRGINIEF RERHKDMDSS DEHEALEIFW TGTSLSDKSV QPSWVFPAGP 240 TGTVYSQQKH LMNRLGNGGG SSTVVVRDIF RSSTSSNACR IMEMPSSSHG YNGDRSSALH 300 QCYNLSKYSS SSMYGPGYRS LGAAITEPGN FVRMSHPAGE LPTSNLGDGT GLRFGSNKKL 360 TNKQDIVHLG HNRSYECPRL SMSYQLQEQL GDPHDESAVE QKEVPAFIDF LGVGISLS

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MEADTVSSSV GGRSSTSRGN NNNIDDLTNK SCPRGHWRPA EDEKLRQLVE QYGPQNWNSI  60
AEKLQGRSGK SCRLRWFNQL DPRINRRPFS VEEEDRLLGA HRVHGNKWAL ISRLFPGRTD  120
NAVKNHWHVI MSRKQRERSK LLYGSKGSSS SSSINYYDKS NGFVGIYSSL RSSHNNDLYN  180
CSNEFQYENS CSSRGINIEF RERHKDMDSS DEHEALEIFW TGTSLSDKSV QPSWVFPAGP  240
TGTVYSQQKH LMNRLGNGGG SSTVVVRDIF RSSTSSNACR IMEMPSSSHG YNGDRSSALH  300
QCYNLSKYSS SSMYGPGYRS LGAAITEPGN FVRMSHPAGE LPTSNLGDGT GLRFGSNKKL  360
TNKQDIVHLG HNRSYECPRL SMSYQLQEQL GDPHDESAVE QKEVPAFIDF LGVGISLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	8e-63	MYB family protein