PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026455347.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 175aa    MW: 20127.9 Da    PI: 10.1928
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026455347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.22.2e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien++nrqvtf+kR+ng+lKKA E+S+LCda+v+v++fs+ g++ eyss
  XP_026455347.1  9 KRIENSTNRQVTFAKRKNGLLKKAREISILCDADVSVVMFSEAGNMTEYSS 59
                    79***********************************************96 PP
2K-box661.3e-2269162198
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     yqk sgk l++ak+e+l+ e+++++ke++nLq e+Rhl+GedL++Ls +eL+ Le++Le++    R+k +e    + ++l+k  + l+eenk+L+
  XP_026455347.1  69 YQKESGKTLWDAKHERLSAEIDRVRKENSNLQIELRHLKGEDLKPLSPQELHALENALEDGYAGARAKIKE----HHRKLKKNGRLLEEENKRLS 159
                     8999***************************************************************9666....56667777777777777776 PP

           K-box  96 kkl 98 
                     + +
  XP_026455347.1 160 ATY 162
                     654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MGRGKTELKR IENSTNRQVT FAKRKNGLLK KAREISILCD ADVSVVMFSE AGNMTEYSSA  60
PLIEQLARYQ KESGKTLWDA KHERLSAEID RVRKENSNLQ IELRHLKGED LKPLSPQELH  120
ALENALEDGY AGARAKIKEH HRKLKKNGRL LEEENKRLSA TYQQQQQNKW NMGAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.12e-56MIKC_MADS family protein