PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026455464.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 475aa    MW: 54853.6 Da    PI: 9.5453
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026455464.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.97.8e-1874159493
                     E-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SSSEE..E CS
              B3   4 vltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.grsefelv 93 
                     vl   ++++  +l +pkk ++++   +++ e s  +tl+ +sgr+W+v+l ++ +s++ +l+kGW+ Fvk+++Lke+D+++Fk++ g+s f   
  XP_026455464.1  74 VL--TNNFR-YQLKFPKKLVNKClvnELS-EIS-VVTLKGPSGRTWTVQL-MKYGSEELYLSKGWEVFVKEHNLKENDVLLFKYNlGTSVF--D 159
                     55..33344.4599********9886555.344.7999************.6777788*************************98554666..4 PP
2B342.71e-13368451186
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-S CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldg 86 
                     f+  +++s+ ++   +++p + a++h  +  ++k + le  +g++W+ k+ ++k +    + ++GW +Fv++n +k+gD ++F+ ++
  XP_026455464.1 368 FVVSMKRSHISAIYYMTVPVDAARKHIAP--GTKRIYLEM-NGKTWKAKYVWKKEGVNsGITGRGWTDFVQENTIKVGDACLFEITS 451
                     667788888888899***********544..556788776.9********9854443347889*********************543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MKLNQRELQL LPASGSSHRA NAQGMGTGNT AFSRLQLEVF KGDRTKMGRK CEDCEKWEEE  60
MYWSKFKVVH FFSVLTNNFR YQLKFPKKLV NKCLVNELSE ISVVTLKGPS GRTWTVQLMK  120
YGSEELYLSK GWEVFVKEHN LKENDVLLFK YNLGTSVFDV VMFDEANFCE KERAHSKNEG  180
SHRSTKEWLD EGRKRVEREP WIDVKGCHKS KGLNEGRKRV EREPSFEIIE TKTVRYKKKA  240
MTISDNDEED EQVYGRVIVH PRLERQPSFE IIEHKKVHYK KKAIAISDDE EEEEVYGRVI  300
VHPRSSNPLP GSKGKALVPV KPEDVSEDDE VTPVNPLALV LKRESGKEEH EVFEQAVREG  360
KRRRAPHFVV SMKRSHISAI YYMTVPVDAA RKHIAPGTKR IYLEMNGKTW KAKYVWKKEG  420
VNSGITGRGW TDFVQENTIK VGDACLFEIT SPSATTSKKS VRFKVSIFRT DEDVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.19e-27B3 family protein