PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026455647.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 246aa    MW: 27002.5 Da    PI: 8.301
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026455647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260102.53.9e-322103197
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C+++C+l+p++     p++q +++ +v+k+FG++ ++++++a+pe++r+++++sl++eA+ r+ +Pv+Gavg+++++++q++q+
  XP_026455647.1   2 SCNGCRVLRKGCSESCILRPCLqwiesPEAQGHATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWQICQT 96 
                     6********************************************************************************************** PP

          DUF260  91 kaelall 97 
                     ++e++l+
  XP_026455647.1  97 AVETVLR 103
                     *998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MSCNGCRVLR KGCSESCILR PCLQWIESPE AQGHATVFVA KFFGRAGLMS FISAVPESQR  60
PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WQICQTAVET VLRGGTLRPI SDVMNGTEIQ  120
AFDQSDDLSV SIQAQQPNFS TMEMKKIIKL DDNHHNSNNN NNLYPSSRSL AKPSKRKVFT  180
QTDLDLSLTT STSGGSGVVN HHHRPEKRRS SSPSMNSEES VTTSLDSSVE RRVSRGVEIK  240
ALDLFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.13e-77LBD family protein