PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026455652.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 256aa    MW: 27860.9 Da    PI: 7.5418
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026455652.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.001692114123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ C+ksF +   L  H  +H
  XP_026455652.1  92 YKCSVCNKSFHSYQALGGHKASH 114
                     9*********9988888887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MALEALTSPS TIPIYEDDHS NYLDQSWAKR KRSKRNIHRM ENSHISNPTE EEYLALCLIM  60
LARGSTDDSS TNLPVYNNCY APPQAPTLKL NYKCSVCNKS FHSYQALGGH KASHRKLVVF  120
APGSSSQQED QLSTSTTTST TTTSAANISS SGKTHECSIC HKCFPSGQAL GGHKRCHYDG  180
GSSITATTAA SSDGMGSTQT HRSSSDFDLN LPALPEFWSA GNFGVHGKNS KYQIFADDEV  240
ESPLPSKKPR LLMDSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.16e-54C2H2 family protein