PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026455811.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 260aa MW: 28832.4 Da PI: 8.9794

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026455811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.5	1.8e-19	44	89	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd++l ++v q+G ++W++++r+++ gR++k+c++rw + XP_026455811.1 44 KGPWSAEEDKILTRLVDQHGARNWSLVSRYIP-GRSGKSCRLRWCNQ 89 79****************************.*********985 PP
2	Myb_DNA-binding	53.8	4.4e-17	98	140	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++ Ede+++da +++G++ W+tIar ++ gRt++ +k++w++ XP_026455811.1 98 PFSLSEDEIILDAQAKYGNR-WATIARLLP-GRTDNAVKNHWNST 140 79999*************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MEPPNTSYSS TNSVCSSSSS ESDSMLLGSG KHTSTIGSKS ERIKGPWSAE EDKILTRLVD 60 QHGARNWSLV SRYIPGRSGK SCRLRWCNQL SPNVEHRPFS LSEDEIILDA QAKYGNRWAT 120 IARLLPGRTD NAVKNHWNST LKRKQRQPQH HHRRQCSNGS NCSTDNYNNN GEGFSSNNNN 180 TTGFMLSSTE SDPPTNLTLA PPGSSYFAAP ESRQTSASSR NENVSGDGFW DAMRDVIARE 240 VRNYVSTSFT SSTETSSRFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	1e-53	MYB family protein