PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026455879.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Trihelix
Protein Properties Length: 171aa    MW: 20267.5 Da    PI: 10.5058
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026455879.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix83.62.5e-2685169186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW+k+e++aLi +r  m +++ +g+ k + Wee+s  m++ gf++++k+Ck+kwen+nk++k+ +++ k+r +e+++tcpyf++l+
  XP_026455879.1  85 RWPKHEIQALISLRMAMPQKMLTGATKFGMWEEISLPMASMGFTKTAKKCKQKWENINKYFKRAARSGKRR-AENVKTCPYFQELD 169
                     8*****************************************************************99997.78889*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MEQKEKDRIT REETWRNLER ERMRKEKETR AQDTHRSLAL LSLLEKFCGQ QEIYTPQSKG  60
QQVIAPSPEI VLPDQSGQEK QRLKRWPKHE IQALISLRMA MPQKMLTGAT KFGMWEEISL  120
PMASMGFTKT AKKCKQKWEN INKYFKRAAR SGKRRAENVK TCPYFQELDM F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.18e-30Trihelix family protein