PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456328.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 269aa MW: 31076.5 Da PI: 6.7971

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456328.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43	7.9e-14	88	159	2	56
T--SS--HHHHHHHHHHHH.................HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFe.................knrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++ ++++eq+++Le+ F+ ++ +++ e++ +L+++lgL rqV +WFqNrRa+ k XP_026456328.1 88 RRKMRLSSEQVDALERSFQeeieldqqpgatlderkNKVKLDPERKMKLSRELGLHPRQVAIWFQNRRARLK 159 6677899************************997799*****************************88 PP
2	HD-ZIP_I/II	89.9	3.1e-29	124	196	20	92
HD-ZIP_I/II 20 eeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ++ kL+perK++l+reLgl+prqva+WFqnrRAR k k++E+ y++Lk+ ++++++en++L++ev +L+++l+ XP_026456328.1 124 NKVKLDPERKMKLSRELGLHPRQVAIWFQNRRARLKGKKIEELYNVLKQDFENVSKENQELKQEVMKLKSRLD 196 455******************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MANWSYCSSR TPQILSPTST TSGGEQQQQN YVSLVHDHRY LYESFGHPYP GYVGAEMMKL 60 WSSSAYECGA ENGVGGHDAN INNQVETRRK MRLSSEQVDA LERSFQEEIE LDQQPGATLD 120 ERKNKVKLDP ERKMKLSREL GLHPRQVAIW FQNRRARLKG KKIEELYNVL KQDFENVSKE 180 NQELKQEVMK LKSRLDDRES MQTSTRYVML PREANHHDKF VDDSTSTRIS ANHPNNISGS 240 STYLFGEDYY STMSSLPYFD VPHCYPSSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36610.1	4e-33	HD-ZIP family protein