PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456340.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 227aa MW: 25820.1 Da PI: 6.9633

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	40.3	5.4e-13	70	104	22	56
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ e++ +L+k+lg+ rqV+vWFqNrRak k XP_026456340.1 70 RTKLDPEKKLKLSKELGIHPRQVTVWFQNRRAKLK 104 678999***************************88 PP
2	HD-ZIP_I/II	84	2.1e-27	69	141	20	92
HD-ZIP_I/II 20 eeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +++kL+pe+K +l++eLg++prqv vWFqnrRA+ k kqlE+ y++L++ y+ +++en++L++ev eL+++l+ XP_026456340.1 69 NRTKLDPEKKLKLSKELGIHPRQVTVWFQNRRAKLKGKQLERLYNVLQQDYEIVSRENQHLQQEVMELKDKLD 141 567******************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MSSCVNDHHE AENGVGVHEA NIINNQVDMT RKKNMLTIEQ VDALEMSFQE EIELEKQQPP 60 GRIAELPKNR TKLDPEKKLK LSKELGIHPR QVTVWFQNRR AKLKGKQLER LYNVLQQDYE 120 IVSRENQHLQ QEVMELKDKL DGLQSMQASI GFMKQGSLLQ AESNNITAHE STWTSVAGQC 180 SNDVEKRQTG NSNTKISWNN SYLFSNEGMS GTRAWLTLAP AVHPHAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36610.1	9e-33	HD-ZIP family protein