PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026456509.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 268aa    MW: 30937.4 Da    PI: 6.1057
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026456509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox42.61.1e-1388159256
                     T--SS--HHHHHHHHHHHH.................HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFe.................knrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     r++ ++++eq+++Le+ F+                 ++ +++ e++ +L+++lgL  rqV +WFqNrRa+ k
  XP_026456509.1  88 RRKMRLSSEQVDALERSFQeeieleqqpdatlderkNKVKLDPERKMKLSRELGLHPRQVAIWFQNRRARLK 159
                     6677899**************************997799*******************************88 PP
2HD-ZIP_I/II87.51.7e-281241962092
     HD-ZIP_I/II  20 eeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     ++ kL+perK++l+reLgl+prqva+WFqnrRAR k k++E+ y++Lk+ ++++ +en++L++ev +L+++l+
  XP_026456509.1 124 NKVKLDPERKMKLSRELGLHPRQVAIWFQNRRARLKGKKIEELYNVLKQDFENVWKENQELKQEVVKLKSRLD 196
                     455******************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MANWSYCSSS TPQILSPTST TSGGEQQQQN YVSFVHDHRY LYESFGHPYP GYVGVDMMKL  60
WSSSAYECGA ENGMGGHDAN INNKVETRRK MRLSSEQVDA LERSFQEEIE LEQQPDATLD  120
ERKNKVKLDP ERKMKLSREL GLHPRQVAIW FQNRRARLKG KKIEELYNVL KQDFENVWKE  180
NQELKQEVVK LKSRLDDRES MQTSTPYVIL PMEANHHDKV VDDNTSTRIS ANNPNNISGC  240
SSYFSGEDYY STVSLPYFDV PHCYPSSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36610.13e-32HD-ZIP family protein