PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026456518.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 285aa    MW: 32246.2 Da    PI: 9.6152
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026456518.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF79.32.7e-2562110149
                     S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 
                     k ie ksnrqvtf+kRrng++KKA+EL+vLC+ae avi+fs+ gk y +
  XP_026456518.1  62 KMIEIKSNRQVTFTKRRNGLFKKASELCVLCGAELAVIVFSPAGKAYSF 110
                     67999****************************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MEIYWHTHIY RLVHANVLTK LGSYFLQFLL DFQALSATMV AMAVKNKKER KPSQGRKKIP  60
IKMIEIKSNR QVTFTKRRNG LFKKASELCV LCGAELAVIV FSPAGKAYSF GNPQVDSTIN  120
RFLSSHDNNN NHQLAIRPNN VHRHGFSAHE QQQQQTQQQY IKVSNQLDLE KKRGVLVEKL  180
KKLNSTDSDK FWWEIPIDGL SLNELEQMKS AMEELKKTVA KRIEELVING AAASSSPVMM  240
PTPFLNPNPI CCMNSYAAVE NLPEAKCSIT ATATTAIVPY DDYNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.19e-40M-type_MADS family protein