PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456717.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 1187aa MW: 132861 Da PI: 9.4779

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456717.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.7	2.6e-08	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE +++++a +++ ++ Wk++a + +R+ +++ XP_026456717.1 47 QWSKEELKRFYEAYRKYEKD-WKKVAGVVR-NRSTEMV 82 6***************99.*****.99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 1187 aa Download sequence
MATRKSRSIN NKRFGKLNEE SPDKDGGSGG NKSRQRKRKL TDMLGPQWSK EELKRFYEAY 60 RKYEKDWKKV AGVVRNRSTE MVEALYHMNR AYLSLPEGTA SVAGLIAMMT DHYCILDGSE 120 SDRESDDAPG VSQKLAKRAR GKYHVNGSRG TDADVPDLLK FPPLSSNNGC FSVKKKRTNG 180 GRRAVGKRTP RYPVSHEREK FVTPNKRGLK SDLDAHDEEV AHGAALTLAE ALQRGGSPQV 240 SHTPKRRSEH LRPSSSRKSE RRRQLDWDKS STKHRGITDE NYLEDSLGSR EAENGDFYRN 300 SSYMMDARGV GTVGVQKKGK KSLGRKPKDI ENCHRDEDRE ACSGTEEGLN LSYVKEQAED 360 EVTDSRYVRP RKKNKELKED EKQALDGLTF LANMSLELEP AAVDESESSV QFKEERGRGS 420 RGNVDNFSRH ETFSTIRQRD KSNFSGVKEK SLREVEVTTL RSARSIKGSS FDVNSLTEEK 480 KPPSQTTIKG QKLKRKHFAA KMQSPTNESH SDLLPDERQQ IEALEENVKK STMKAKRVAA 540 AAVISKQGKS FRPPELTSSS TDLVRPGTDA ALSTEQVPTP NQVFLPTKHE SRRKMNLQKS 600 LIRRVSNFSE DMGSKQPGKH TSQDGTLDIK EKLSRCLSSP MLRRWCAFEW FYSAIDYPWF 660 AKKEFVEYLN HVGLGHVPRL TRVEWGVIRS SLGKPRRLSQ QFLREEKEKL EQYRESVRTH 720 YTELRNGTRD GLPTDLARPL SVGQRVIACH PRTREFHDGS VLTVDRNRCR IQFDRPELGV 780 EFVMDIDCMP LNAFENMPEA LRRQNIAAGR LSENLSDPKL NNQSKDRTTG GYKSIAPSAK 840 LETADVSSQL TSPIYPMNTL IKKAEGDTIS DIAEAKAAAN ELKAAYIQPC TLAQIQAREA 900 DIRALSELSR ALEKKEALVS ELSRMNDEVQ ENQINGDNSL KDHDPFKKQY ATVLIQLKEA 960 NDQVSSALIY LRKRNTYQGN SPPWQTSKPG SGVPVGPFNS IDASAFLPQE AASHVVGILE 1020 SSRVKAQTMV DVAVQALLSC KDGEDAFGSI GDALDSASTH QNGTEVRSFT STDLINGGSF 1080 HYQDAATNSH ISKPVMAVYS NGTKQNNSTF DANEVQIPKD LISSCLATLL MVQTCTERQY 1140 PPAEVAQILD SAFTSLHPCC SQNLPIYQEI RLCMGLVKNQ ILALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1187 aa Download sequence

MATRKSRSIN NKRFGKLNEE SPDKDGGSGG NKSRQRKRKL TDMLGPQWSK EELKRFYEAY  60
RKYEKDWKKV AGVVRNRSTE MVEALYHMNR AYLSLPEGTA SVAGLIAMMT DHYCILDGSE  120
SDRESDDAPG VSQKLAKRAR GKYHVNGSRG TDADVPDLLK FPPLSSNNGC FSVKKKRTNG  180
GRRAVGKRTP RYPVSHEREK FVTPNKRGLK SDLDAHDEEV AHGAALTLAE ALQRGGSPQV  240
SHTPKRRSEH LRPSSSRKSE RRRQLDWDKS STKHRGITDE NYLEDSLGSR EAENGDFYRN  300
SSYMMDARGV GTVGVQKKGK KSLGRKPKDI ENCHRDEDRE ACSGTEEGLN LSYVKEQAED  360
EVTDSRYVRP RKKNKELKED EKQALDGLTF LANMSLELEP AAVDESESSV QFKEERGRGS  420
RGNVDNFSRH ETFSTIRQRD KSNFSGVKEK SLREVEVTTL RSARSIKGSS FDVNSLTEEK  480
KPPSQTTIKG QKLKRKHFAA KMQSPTNESH SDLLPDERQQ IEALEENVKK STMKAKRVAA  540
AAVISKQGKS FRPPELTSSS TDLVRPGTDA ALSTEQVPTP NQVFLPTKHE SRRKMNLQKS  600
LIRRVSNFSE DMGSKQPGKH TSQDGTLDIK EKLSRCLSSP MLRRWCAFEW FYSAIDYPWF  660
AKKEFVEYLN HVGLGHVPRL TRVEWGVIRS SLGKPRRLSQ QFLREEKEKL EQYRESVRTH  720
YTELRNGTRD GLPTDLARPL SVGQRVIACH PRTREFHDGS VLTVDRNRCR IQFDRPELGV  780
EFVMDIDCMP LNAFENMPEA LRRQNIAAGR LSENLSDPKL NNQSKDRTTG GYKSIAPSAK  840
LETADVSSQL TSPIYPMNTL IKKAEGDTIS DIAEAKAAAN ELKAAYIQPC TLAQIQAREA  900
DIRALSELSR ALEKKEALVS ELSRMNDEVQ ENQINGDNSL KDHDPFKKQY ATVLIQLKEA  960
NDQVSSALIY LRKRNTYQGN SPPWQTSKPG SGVPVGPFNS IDASAFLPQE AASHVVGILE  1020
SSRVKAQTMV DVAVQALLSC KDGEDAFGSI GDALDSASTH QNGTEVRSFT STDLINGGSF  1080
HYQDAATNSH ISKPVMAVYS NGTKQNNSTF DANEVQIPKD LISSCLATLL MVQTCTERQY  1140
PPAEVAQILD SAFTSLHPCC SQNLPIYQEI RLCMGLVKNQ ILALIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	480	496	KKPPSQTTIKGQKLKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein