PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456719.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 1184aa MW: 132558 Da PI: 9.5204

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.7	2.6e-08	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE +++++a +++ ++ Wk++a + +R+ +++ XP_026456719.1 47 QWSKEELKRFYEAYRKYEKD-WKKVAGVVR-NRSTEMV 82 6***************99.*****.99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 1184 aa Download sequence
MATRKSRSIN NKRFGKLNEE SPDKDGGSGG NKSRQRKRKL TDMLGPQWSK EELKRFYEAY 60 RKYEKDWKKV AGVVRNRSTE MVEALYHMNR AYLSLPEGTA SVAGLIAMMT DHYCILDGSE 120 SDRESDDAPG VSQKLAKRAR GKYHVNGSRG TDADVPDLLK FPPLSSNNGC FSVKKKRTNG 180 GRRAVGKRTP RYPVSHEREK FVTPNKRGLK SDLDAHDEEV AHGAALTLAE ALQRGGSPQV 240 SHTPKRRSEH LRPSSSRKSE RRRQLDWDKS STKHRGITDE NYLEDSLGSR EAENGDFYRN 300 SSYMMDARGV GTVGVQKKGK KSLGRKPKDI ENCHRDEDRE ACSGTEEGLN LSYVKEQAED 360 EVTDSRYVRP RKKNKELKED EKQALDGLTF LANMSLELEP AAVDESVQFK EERGRGSRGN 420 VDNFSRHETF STIRQRDKSN FSGVKEKSLR EVEVTTLRSA RSIKGSSFDV NSLTEEKKPP 480 SQTTIKGQKL KRKHFAAKMQ SPTNESHSDL LPDERQQIEA LEENVKKSTM KAKRVAAAAV 540 ISKQGKSFRP PELTSSSTDL VRPGTDAALS TEQVPTPNQV FLPTKHESRR KMNLQKSLIR 600 RVSNFSEDMG SKQPGKHTSQ DGTLDIKEKL SRCLSSPMLR RWCAFEWFYS AIDYPWFAKK 660 EFVEYLNHVG LGHVPRLTRV EWGVIRSSLG KPRRLSQQFL REEKEKLEQY RESVRTHYTE 720 LRNGTRDGLP TDLARPLSVG QRVIACHPRT REFHDGSVLT VDRNRCRIQF DRPELGVEFV 780 MDIDCMPLNA FENMPEALRR QNIAAGRLSE NLSDPKLNNQ SKDRTTGGYK SIAPSAKLET 840 ADVSSQLTSP IYPMNTLIKK AEGDTISDIA EAKAAANELK AAYIQPCTLA QIQAREADIR 900 ALSELSRALE KKEALVSELS RMNDEVQENQ INGDNSLKDH DPFKKQYATV LIQLKEANDQ 960 VSSALIYLRK RNTYQGNSPP WQTSKPGSGV PVGPFNSIDA SAFLPQEAAS HVVGILESSR 1020 VKAQTMVDVA VQALLSCKDG EDAFGSIGDA LDSASTHQNG TEVRSFTSTD LINGGSFHYQ 1080 DAATNSHISK PVMAVYSNGT KQNNSTFDAN EVQIPKDLIS SCLATLLMVQ TCTERQYPPA 1140 EVAQILDSAF TSLHPCCSQN LPIYQEIRLC MGLVKNQILA LIPT

Sequence ? help Back to Top

Protein Sequence Length: 1184 aa Download sequence

MATRKSRSIN NKRFGKLNEE SPDKDGGSGG NKSRQRKRKL TDMLGPQWSK EELKRFYEAY  60
RKYEKDWKKV AGVVRNRSTE MVEALYHMNR AYLSLPEGTA SVAGLIAMMT DHYCILDGSE  120
SDRESDDAPG VSQKLAKRAR GKYHVNGSRG TDADVPDLLK FPPLSSNNGC FSVKKKRTNG  180
GRRAVGKRTP RYPVSHEREK FVTPNKRGLK SDLDAHDEEV AHGAALTLAE ALQRGGSPQV  240
SHTPKRRSEH LRPSSSRKSE RRRQLDWDKS STKHRGITDE NYLEDSLGSR EAENGDFYRN  300
SSYMMDARGV GTVGVQKKGK KSLGRKPKDI ENCHRDEDRE ACSGTEEGLN LSYVKEQAED  360
EVTDSRYVRP RKKNKELKED EKQALDGLTF LANMSLELEP AAVDESVQFK EERGRGSRGN  420
VDNFSRHETF STIRQRDKSN FSGVKEKSLR EVEVTTLRSA RSIKGSSFDV NSLTEEKKPP  480
SQTTIKGQKL KRKHFAAKMQ SPTNESHSDL LPDERQQIEA LEENVKKSTM KAKRVAAAAV  540
ISKQGKSFRP PELTSSSTDL VRPGTDAALS TEQVPTPNQV FLPTKHESRR KMNLQKSLIR  600
RVSNFSEDMG SKQPGKHTSQ DGTLDIKEKL SRCLSSPMLR RWCAFEWFYS AIDYPWFAKK  660
EFVEYLNHVG LGHVPRLTRV EWGVIRSSLG KPRRLSQQFL REEKEKLEQY RESVRTHYTE  720
LRNGTRDGLP TDLARPLSVG QRVIACHPRT REFHDGSVLT VDRNRCRIQF DRPELGVEFV  780
MDIDCMPLNA FENMPEALRR QNIAAGRLSE NLSDPKLNNQ SKDRTTGGYK SIAPSAKLET  840
ADVSSQLTSP IYPMNTLIKK AEGDTISDIA EAKAAANELK AAYIQPCTLA QIQAREADIR  900
ALSELSRALE KKEALVSELS RMNDEVQENQ INGDNSLKDH DPFKKQYATV LIQLKEANDQ  960
VSSALIYLRK RNTYQGNSPP WQTSKPGSGV PVGPFNSIDA SAFLPQEAAS HVVGILESSR  1020
VKAQTMVDVA VQALLSCKDG EDAFGSIGDA LDSASTHQNG TEVRSFTSTD LINGGSFHYQ  1080
DAATNSHISK PVMAVYSNGT KQNNSTFDAN EVQIPKDLIS SCLATLLMVQ TCTERQYPPA  1140
EVAQILDSAF TSLHPCCSQN LPIYQEIRLC MGLVKNQILA LIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	477	493	KKPPSQTTIKGQKLKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein