PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456721.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 1158aa MW: 129716 Da PI: 9.3913

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.8	2.5e-08	47	82	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE +++++a +++ ++ Wk++a + +R+ +++ XP_026456721.1 47 QWSKEELKRFYEAYRKYEKD-WKKVAGVVR-NRSTEMV 82 6***************99.*****.99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 1158 aa Download sequence
MATRKSRSIN NKRFGKLNEE SPDKDGGSGG NKSRQRKRKL TDMLGPQWSK EELKRFYEAY 60 RKYEKDWKKV AGVVRNRSTE MVEALYHMNR AYLSLPEGTA SVAGLIAMMT DHYCILDGSE 120 SDRESDDAPG VSQKLAKRAR GKYHVNGSRG TDADVPDLLK FPPLSSNNGC FSVKKKRTNG 180 GRRAVGKRTP RYPVSHEREK FVTPNKRGLK SDLDAHDEEV AHGAALTLAE ALQRGGSPQV 240 SHTPKRRSEH LRPSSSRKSE RRRQLDWDKS STKHRGITDE NYLEDSLGSR EAENGDFYRN 300 SSYMMDARGV GTVGVQKKGK KSLGRKPKDI ENCHRDEDRE ACSGTEEGLN LSYVKEQAED 360 EVTDSRYVRP RKKNKELKED EKQALDGLTF LANMSLELEP AAVDESESSV QFKEERGRGS 420 RGNVDNFSRH ETFSTIRQRD KSNFSGVKEK SLREVETTIK GQKLKRKHFA AKMQSPTNES 480 HSDLLPDERQ QIEALEENVK KSTMKAKRVA AAAVISKQGK SFRPPELTSS STDLVRPGTD 540 AALSTEQVPT PNQVFLPTKH ESRRKMNLQK SLIRRVSNFS EDMGSKQPGK HTSQDGTLDI 600 KEKLSRCLSS PMLRRWCAFE WFYSAIDYPW FAKKEFVEYL NHVGLGHVPR LTRVEWGVIR 660 SSLGKPRRLS QQFLREEKEK LEQYRESVRT HYTELRNGTR DGLPTDLARP LSVGQRVIAC 720 HPRTREFHDG SVLTVDRNRC RIQFDRPELG VEFVMDIDCM PLNAFENMPE ALRRQNIAAG 780 RLSENLSDPK LNNQSKDRTT GGYKSIAPSA KLETADVSSQ LTSPIYPMNT LIKKAEGDTI 840 SDIAEAKAAA NELKAAYIQP CTLAQIQARE ADIRALSELS RALEKKEALV SELSRMNDEV 900 QENQINGDNS LKDHDPFKKQ YATVLIQLKE ANDQVSSALI YLRKRNTYQG NSPPWQTSKP 960 GSGVPVGPFN SIDASAFLPQ EAASHVVGIL ESSRVKAQTM VDVAVQALLS CKDGEDAFGS 1020 IGDALDSAST HQNGTEVRSF TSTDLINGGS FHYQDAATNS HISKPVMAVY SNGTKQNNST 1080 FDANEVQIPK DLISSCLATL LMVQTCTERQ YPPAEVAQIL DSAFTSLHPC CSQNLPIYQE 1140 IRLCMGLVKN QILALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1158 aa Download sequence

MATRKSRSIN NKRFGKLNEE SPDKDGGSGG NKSRQRKRKL TDMLGPQWSK EELKRFYEAY  60
RKYEKDWKKV AGVVRNRSTE MVEALYHMNR AYLSLPEGTA SVAGLIAMMT DHYCILDGSE  120
SDRESDDAPG VSQKLAKRAR GKYHVNGSRG TDADVPDLLK FPPLSSNNGC FSVKKKRTNG  180
GRRAVGKRTP RYPVSHEREK FVTPNKRGLK SDLDAHDEEV AHGAALTLAE ALQRGGSPQV  240
SHTPKRRSEH LRPSSSRKSE RRRQLDWDKS STKHRGITDE NYLEDSLGSR EAENGDFYRN  300
SSYMMDARGV GTVGVQKKGK KSLGRKPKDI ENCHRDEDRE ACSGTEEGLN LSYVKEQAED  360
EVTDSRYVRP RKKNKELKED EKQALDGLTF LANMSLELEP AAVDESESSV QFKEERGRGS  420
RGNVDNFSRH ETFSTIRQRD KSNFSGVKEK SLREVETTIK GQKLKRKHFA AKMQSPTNES  480
HSDLLPDERQ QIEALEENVK KSTMKAKRVA AAAVISKQGK SFRPPELTSS STDLVRPGTD  540
AALSTEQVPT PNQVFLPTKH ESRRKMNLQK SLIRRVSNFS EDMGSKQPGK HTSQDGTLDI  600
KEKLSRCLSS PMLRRWCAFE WFYSAIDYPW FAKKEFVEYL NHVGLGHVPR LTRVEWGVIR  660
SSLGKPRRLS QQFLREEKEK LEQYRESVRT HYTELRNGTR DGLPTDLARP LSVGQRVIAC  720
HPRTREFHDG SVLTVDRNRC RIQFDRPELG VEFVMDIDCM PLNAFENMPE ALRRQNIAAG  780
RLSENLSDPK LNNQSKDRTT GGYKSIAPSA KLETADVSSQ LTSPIYPMNT LIKKAEGDTI  840
SDIAEAKAAA NELKAAYIQP CTLAQIQARE ADIRALSELS RALEKKEALV SELSRMNDEV  900
QENQINGDNS LKDHDPFKKQ YATVLIQLKE ANDQVSSALI YLRKRNTYQG NSPPWQTSKP  960
GSGVPVGPFN SIDASAFLPQ EAASHVVGIL ESSRVKAQTM VDVAVQALLS CKDGEDAFGS  1020
IGDALDSAST HQNGTEVRSF TSTDLINGGS FHYQDAATNS HISKPVMAVY SNGTKQNNST  1080
FDANEVQIPK DLISSCLATL LMVQTCTERQ YPPAEVAQIL DSAFTSLHPC CSQNLPIYQE  1140
IRLCMGLVKN QILALIPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein