PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456825.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 563aa MW: 59779.1 Da PI: 5.1192

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456825.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.8	3.3e-10	199	243	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++WT eEd l+ avk+lG ++W+ I + g Rt+ q+ rw XP_026456825.1 199 RKPWTLEEDNELIAAVKKLGERNWANILKadFKG-DRTASQLSQRW 243 789************************7621455.89999988888 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MASSNNTKRR KGLISEEDIA SLLKRYSAPT ILAVLKEVAQ FPDVKIDWNV LVTKSATGIS 60 NAWEYQMLWR HLAYCSVLPE TVEEKPEPLD DDSDLEYELE TFPPASDEAS LEAAACVKVL 120 LASGLPDDAG GPATVEAPLT INIPSLQDSK SPSDNPQPSR INITFPVSVQ KQSSPAVTTA 180 EGLDGTGPSA GSQPARRKRK PWTLEEDNEL IAAVKKLGER NWANILKADF KGDRTASQLS 240 QRWSIIRKRN SANLETVGGS GSQSELTEQQ LATRRAVSIA LNMPMNSSLS AACAVEAATG 300 SSQQIPLQTA LSLPKGTSSV TTKPRGTTKK AASVVPNPMI QAAAVAAGAR IATPSTAKSL 360 LKAAQSKSAV HISTIGKSSI PGVTPPLTPN NSGTRPNVHY ICTGLSPAMK DKVPLVSAVT 420 SASTLCGTTA AGKKTNGVTS VVVGNSSKEE KVQSSPNEDE VKNSPKEVVK TSSIDSEIKN 480 SSNEEGVKNS SNEQPVKPEE MEIDCAADIA KYGKQQDQAA LPDPDMVIED VMTQNLSKLP 540 DEEAAVSDPM QLDNHHIENE KEN

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MASSNNTKRR KGLISEEDIA SLLKRYSAPT ILAVLKEVAQ FPDVKIDWNV LVTKSATGIS  60
NAWEYQMLWR HLAYCSVLPE TVEEKPEPLD DDSDLEYELE TFPPASDEAS LEAAACVKVL  120
LASGLPDDAG GPATVEAPLT INIPSLQDSK SPSDNPQPSR INITFPVSVQ KQSSPAVTTA  180
EGLDGTGPSA GSQPARRKRK PWTLEEDNEL IAAVKKLGER NWANILKADF KGDRTASQLS  240
QRWSIIRKRN SANLETVGGS GSQSELTEQQ LATRRAVSIA LNMPMNSSLS AACAVEAATG  300
SSQQIPLQTA LSLPKGTSSV TTKPRGTTKK AASVVPNPMI QAAAVAAGAR IATPSTAKSL  360
LKAAQSKSAV HISTIGKSSI PGVTPPLTPN NSGTRPNVHY ICTGLSPAMK DKVPLVSAVT  420
SASTLCGTTA AGKKTNGVTS VVVGNSSKEE KVQSSPNEDE VKNSPKEVVK TSSIDSEIKN  480
SSNEEGVKNS SNEQPVKPEE MEIDCAADIA KYGKQQDQAA LPDPDMVIED VMTQNLSKLP  540
DEEAAVSDPM QLDNHHIENE KEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	1e-70	MYB_related family protein