PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026456846.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 301aa    MW: 34955.4 Da    PI: 8.8957
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026456846.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.41.7e-1526116199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+++++ ++ +  + +  +f++++    e +   +l  +sg++W+v+l   k +++y++++GW++Fv +n    gDf+vFk++++ +f  +v+
  XP_026456846.1  26 FFKIFLSPKSFYK--MKVRVEFLAQIT--REIPGIFSLCGPSGKVWRVRL--LKMDDGYYFEEGWQDFVIDNYTSNGDFCVFKYVDKLCF--LVQ 112
                     5566655555555..455567776664..3355578999***********..********************************998888..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f+ 
  XP_026456846.1 113 IFDG 116
                     9985 PP
2B346.94.8e-15193280798
                     .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      s+v +  +l lp +f + +   +++s+ +tl+d++g++W+v++ ++++++   lt+GW++    n++++ D+++++l++ +ef  ++++fr
  XP_026456846.1 193 VSHVYTGFCLPLPSSFWKVCL--PHCSQGMTLRDPRGKRWDVRFYVNQTRQIAQLTEGWRKISFTNNIEASDVCILELVKPKEF--KLHIFR 280
                     5888999999******97775..468899***************77888888**************************998888..777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MVRPRRSEMG SSLHSASLTN VRPVEFFKIF LSPKSFYKMK VRVEFLAQIT REIPGIFSLC  60
GPSGKVWRVR LLKMDDGYYF EEGWQDFVID NYTSNGDFCV FKYVDKLCFL VQIFDGNSCE  120
KESAFQANCS QPCTTNFSAN CKGKKAVKKQ SERLGGRFIS QRRDITYEEE MMALDAAGEF  180
VSKMPYTMIT MRVSHVYTGF CLPLPSSFWK VCLPHCSQGM TLRDPRGKRW DVRFYVNQTR  240
QIAQLTEGWR KISFTNNIEA SDVCILELVK PKEFKLHIFR VVEEITPLRR ERDIRNGTDC  300
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-15B3 family protein