PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026456879.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family ARF
Protein Properties Length: 917aa    MW: 100870 Da    PI: 5.3225
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026456879.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.43.2e-24135236199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae+       ++++++ ++l++ d++ +sW++++iyr++++r++lt+GW+ Fv +++Lk+gD v+F +d  ++
  XP_026456879.1 135 FCKTLTASDTSTHGGFSVPRRAAEKLfppldySMQPPT-QELIVHDLHDNSWTFRHIYRGQPKRHLLTTGWSVFVGSKRLKAGDAVLFIRD--ER 226
                     99*********************999*****9555554.49************************************************54..56 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l+v+v+r+
  XP_026456879.1 227 SQLMVGVRRA 236
                     666*****97 PP
2Auxin_resp106.33.4e-35261344183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++s+F+++YnPra++seFv+++ +++kal+ ++vs+GmRf m++ete+s +rr++Gtvvg+sdld +rWpnSkW +L+
  XP_026456879.1 261 AAHAAANRSPFTIFYNPRACPSEFVIPLTRFQKALYgTQVSIGMRFGMMLETEESGKRRYMGTVVGISDLDHLRWPNSKWCNLQ 344
                     79**********************************9*******************************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 917 aa     Download sequence    
MAAQPTNTLL EEMKALKEFQ DQSEAKKSIN SELWHACAGP LVSLPQTGSL VLYFPQGHSE  60
QVAVSTKRAA TSQIPNYPGL PSQLTCQVHN VTLHCDKETD EIFAQMTLQP VNSEKDVFPF  120
PDFGVKINKH PTEFFCKTLT ASDTSTHGGF SVPRRAAEKL FPPLDYSMQP PTQELIVHDL  180
HDNSWTFRHI YRGQPKRHLL TTGWSVFVGS KRLKAGDAVL FIRDERSQLM VGVRRANHQQ  240
TNLPSSVLSA DSMHFGVLAA AAHAAANRSP FTIFYNPRAC PSEFVIPLTR FQKALYGTQV  300
SIGMRFGMML ETEESGKRRY MGTVVGISDL DHLRWPNSKW CNLQVEWDEA GCGDKQNRVS  360
LWDIETPESL FIFPSLTSNL KRPVHSGFGE NDWGNLFKRP FARGPENGTG AFSYSSFPSL  420
LKPPAAGPIG AMSAGYLPPC VTRGTPLLVG ESSVKPFASQ KSQFLSIDGT SLQNHNSCQN  480
ILDVPQILKS NLLPQTHARE NINPPFKVES QSSPKPQSEK PETRPVVVSD QLNQPASSSK  540
CTEDKLDGSM NSHTLVNQML HPNQGMLLPQ TSQQLEPNTL LQHQIDTLPF DASNATGLLP  600
YPMNLSSSQY LDNDDWMLHS GQSLAGILRS PALPSGCGLE DLPMLYSEMG NVAATSLGQE  660
TWASQLNYLR YLSQEQELTP CLQRLPTTLQ GFSNSGVGLK DLSEDSKNQC EIYSVHFESS  720
NGGSTIIDPS VSSTAFDGIG SLGIEGFQSS NCLVGNFSSN QDVQSQITTA SMVDSQAFSL  780
QELQDNSGGT SSSNIDLDDT GLLQNGSWQQ ISPPLRTYTK VQKVGSVGRS IDVTRFKNYD  840
DLRSAIACMF GLDGMLDDPR GSSWKLVYVD YENDVLLVGD DPWEEFVSCV RCIRILSPSE  900
VQQMSEDGLN LLSNTVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein