PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026457131.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 954aa MW: 104849 Da PI: 6.0363

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026457131.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.1	8e-19	338	438	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k+l+ sd+++ grlvlpk +ae++ ++++e++ ++++d +g+ W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_026457131.1 338 FEKILSASDAGRIGRLVLPKACAEAYfpPISQPEGVPIRIQDAKGKDWLFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PEGK 430 99************************677779999***********99899999999.*******************987.7777 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++++ XP_026457131.1 431 LVMGFRKA 438 88777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 954 aa Download sequence
MESMKVCANV LCTSSRNRND TSTSTIEWRK GWDLRSGGSA VLCHNCGFAY EQSVYCEAFH 60 TKESGWRECI SCGKRLHCGC IVSKSLFELL DDGGVECISC TKNLKYSSMQ SHENQNGFAT 120 ALALINNAGE IRSASIEDRV DGPSINMGKL LQMGKSIEVD GQISLLESLR NASNGQIKRG 180 QVPLGEGWST VFSNLNQVPV GSCEIIKQVN GKEMLGVKNL DESLSQTCLS INVGASLGNT 240 NLALTLSGSA VEGRDLSTFP SSYPHGQRSR NLLPRPPRVG LAIGSEGTKD GVPQVRVARP 300 PVEGRGRNQL LPRYWPRITE EELQQISGDS NSTIVPLFEK ILSASDAGRI GRLVLPKACA 360 EAYFPPISQP EGVPIRIQDA KGKDWLFQFR FWPNNNSRMY VLEGVTPCIQ SMQLQAGDTV 420 TFSRIDPEGK LVMGFRKASN SVNLQDSQIS AIANGALGNA SFFPDVIENL PIASGYAGLL 480 QSLKGSTDPH LNAMSEHIRI GGDFSWHETE KQGKRSNEGM QLQHLLLPEK KRSRNIGSKS 540 KRLLIDSESA LELKLTWEDA QDLLRPPPSI KPSIVIIEDH EFEEYEEPPV FGKRTIFTSG 600 PAGVQAQWAQ CDNCSKWRRL PIDVLVPPKW TCVDNVWDSK RCTCSGPDEL TPKLLEHLLR 660 LDMEFKMQSM STSDKERQEH ESSGLDTLAT AAFLGNKNGD DSAVAPSVAT TTRHPRHRPG 720 CTCIVCIQPP SGKGPKHKPT CTCNVCMTVK RRFKTLMLRK KKRQSEKEAE IAQRNKCNVE 780 SSRDEIEVES ASRGIVFPVD VSENREACQA IESESANESR THIEKDLTVS VKSGHLDLNS 840 DPDHRSEELQ AVAAAAAGMS ERVSMVSLLQ EASLPLETYL KQNELRSLVH EQQQLQISSP 900 NSNDVLPQAA NDGESDEQPA HDDQDACIAS EVPEREKGAD KGDDMLDPAK NDSS

Sequence ? help Back to Top

Protein Sequence Length: 954 aa Download sequence

MESMKVCANV LCTSSRNRND TSTSTIEWRK GWDLRSGGSA VLCHNCGFAY EQSVYCEAFH  60
TKESGWRECI SCGKRLHCGC IVSKSLFELL DDGGVECISC TKNLKYSSMQ SHENQNGFAT  120
ALALINNAGE IRSASIEDRV DGPSINMGKL LQMGKSIEVD GQISLLESLR NASNGQIKRG  180
QVPLGEGWST VFSNLNQVPV GSCEIIKQVN GKEMLGVKNL DESLSQTCLS INVGASLGNT  240
NLALTLSGSA VEGRDLSTFP SSYPHGQRSR NLLPRPPRVG LAIGSEGTKD GVPQVRVARP  300
PVEGRGRNQL LPRYWPRITE EELQQISGDS NSTIVPLFEK ILSASDAGRI GRLVLPKACA  360
EAYFPPISQP EGVPIRIQDA KGKDWLFQFR FWPNNNSRMY VLEGVTPCIQ SMQLQAGDTV  420
TFSRIDPEGK LVMGFRKASN SVNLQDSQIS AIANGALGNA SFFPDVIENL PIASGYAGLL  480
QSLKGSTDPH LNAMSEHIRI GGDFSWHETE KQGKRSNEGM QLQHLLLPEK KRSRNIGSKS  540
KRLLIDSESA LELKLTWEDA QDLLRPPPSI KPSIVIIEDH EFEEYEEPPV FGKRTIFTSG  600
PAGVQAQWAQ CDNCSKWRRL PIDVLVPPKW TCVDNVWDSK RCTCSGPDEL TPKLLEHLLR  660
LDMEFKMQSM STSDKERQEH ESSGLDTLAT AAFLGNKNGD DSAVAPSVAT TTRHPRHRPG  720
CTCIVCIQPP SGKGPKHKPT CTCNVCMTVK RRFKTLMLRK KKRQSEKEAE IAQRNKCNVE  780
SSRDEIEVES ASRGIVFPVD VSENREACQA IESESANESR THIEKDLTVS VKSGHLDLNS  840
DPDHRSEELQ AVAAAAAGMS ERVSMVSLLQ EASLPLETYL KQNELRSLVH EQQQLQISSP  900
NSNDVLPQAA NDGESDEQPA HDDQDACIAS EVPEREKGAD KGDDMLDPAK NDSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	750	761	KRRFKTLMLRKK
2	750	763	KRRFKTLMLRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein