PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026457309.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WRKY

Protein Properties

Length: 639aa MW: 70494.4 Da PI: 7.077

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026457309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.4e-30	358	416	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r++ed++v+++tYeg+Hnh+ XP_026457309.1 358 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCSEDKTVLITTYEGNHNHP 416 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence
MGTHERDDLK EITTTTPEMS NPGGGEFRTP PTNGGDDHNH SSNKHTANKN PSLSVADTSS 60 NKMKNFFSSD EHQKHREVGG RERVSVDLYN PKQHQDHMKI ELAKTEPTTT NISSTGLVNT 120 SGGMLIGSKF EEDKLVVQEE KPKIQLMSAM RVELERLKNE NQMLKSMLDH VTHDYTTLHS 180 QLLRTMQSQN NNQLDHHHDL LQINCDQRYN TTSNSASRKT LSVRQFMDPN PSKGAILNLD 240 MNEPSHSEAA ATDDDHEMTT QQPSTSVTNY IEAEESVSKE YHLFSEDVAA NSRKRPTMKE 300 ETEDINDQVY RSNLKNQKSA QSKSSGSSVE EEVPPAAVAA CRKARVSVRA QSEAPLISDG 360 CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQVQRCSE DKTVLITTYE GNHNHPLPPQ 420 ATAMAHTTTA AANMLLSGST MSNNREPTLS ASLFSSPSAA PIFPYNANIA TLSASAPFPT 480 ITLDLTTTPN VHHQHHHQTP PPADPRQFQR QPLFPLPLQA YPPHSQSLLR PPYLVNPPNP 540 LRVASAIPSA QLATQQQQGM VEMVTAAITS DPNFTTALAA AISSIMGAPM RNTHELNNSN 600 NNNSNNKNNS SASEVTTVQP ALPNHMHPHT SCPNTFNPM

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence

MGTHERDDLK EITTTTPEMS NPGGGEFRTP PTNGGDDHNH SSNKHTANKN PSLSVADTSS  60
NKMKNFFSSD EHQKHREVGG RERVSVDLYN PKQHQDHMKI ELAKTEPTTT NISSTGLVNT  120
SGGMLIGSKF EEDKLVVQEE KPKIQLMSAM RVELERLKNE NQMLKSMLDH VTHDYTTLHS  180
QLLRTMQSQN NNQLDHHHDL LQINCDQRYN TTSNSASRKT LSVRQFMDPN PSKGAILNLD  240
MNEPSHSEAA ATDDDHEMTT QQPSTSVTNY IEAEESVSKE YHLFSEDVAA NSRKRPTMKE  300
ETEDINDQVY RSNLKNQKSA QSKSSGSSVE EEVPPAAVAA CRKARVSVRA QSEAPLISDG  360
CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP VRKQVQRCSE DKTVLITTYE GNHNHPLPPQ  420
ATAMAHTTTA AANMLLSGST MSNNREPTLS ASLFSSPSAA PIFPYNANIA TLSASAPFPT  480
ITLDLTTTPN VHHQHHHQTP PPADPRQFQR QPLFPLPLQA YPPHSQSLLR PPYLVNPPNP  540
LRVASAIPSA QLATQQQQGM VEMVTAAITS DPNFTTALAA AISSIMGAPM RNTHELNNSN  600
NNNSNNKNNS SASEVTTVQP ALPNHMHPHT SCPNTFNPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	3e-70	WRKY family protein